Create a Domain Multi-Product Platform for an R&D Startup
Case studies

Challenge

A biopharmaceutical startup that introduces research and discovery of next-gen precision medicines by targeting molecules that underlie human disease approached us with an internal deficit of domain-centric development resources. They needed to build R&D infrastructure from scratch and accelerate time-to-market, leveraging the best life science computational practices.

Solution

Alongside the DevOps engagement, Quantori provided the project management and development team with a three-stream plan. The AWS  — based architecture enabled smoothly digitalizing the R&D process with the Genedata for experiment management. The team synchronized Genedata with ChemAxon to store lots and compounds, implemented a custom parser to enable integrations for Genedata with CROs, ChemAxon API  — integration to Benchling for molecule inventory, and Spotfire-ChemAxon connector to extract metadata. The team also installed Study Tracker, RELION cluster, CryoSPARC and PSILO. Within a scaling project, the team centers on system monitoring with AWS CloudWatch.

Outcome

The Quantori team built and implemented the entire bioinformatic infrastructure within less than nine months, and utilized QHPC as a scientific account accelerator to significantly reduce project timeframes.

Scientific Informatics

AWS

GCP

Article Clasterization Tool to Improve the Bibliography Search

Quantori Team built a high-performance bibliographic tool using the optimized datasets provided by the customer.

GCP

Calculation of 15,000 Human Genomes using GCP

To support the project, Quantori Team introduced the GCP infrastructure and the Terra Baer portal environment.

HPC

Seamlessly Integrate AWS HPC Platform for Cell Image Analysis

Quantori introduced our HPC (High Performance Computing) platform, optimized the client’s applications for AWS hardware, and migrated the on-premises pipelines to AWS.

HPC

Develop an AWS HPC Platform for Molecular Docking

This powerful platform can scale from small runs with a few thousand ligands up to millions without reconfiguration.

Work space with laptop and Quantori merch

Data Science

Design, Implement and Support Life Science IT Infrastructure, Oligo Design and Ordering

Quantori team built a back-end service as a sophisticated bioinformatic constructor for reaction components and chemical conditions to control PCR and qPCR.